Basic storage unity for ND array. Creates a big chunk of memory. More...

#include <ndarray.h>

Inherited by npl::MRImageStore< D, T > [virtual].

Public Member Functions
	NDArrayStore ()
	Constructor with initializer list. Orientation will be default (direction = identity, spacing = 1, origin = 0). More...

	NDArrayStore (const std::initializer_list< size_t > &dim)
	Constructor with initializer list. Orientation will be default (direction = identity, spacing = 1, origin = 0). More...

	NDArrayStore (const std::vector< size_t > &dim)
	Constructor with vector. Orientation will be default (direction = identity, spacing = 1, origin = 0). More...

	NDArrayStore (size_t len, const size_t *dim)
	Constructor with array of length len, Orientation will be default (direction = identity, spacing = 1, origin = 0). More...

	NDArrayStore (size_t len, const size_t dim, T ptr, const std::function< void(void *)> &deleter)
	Constructor which uses a preexsting array, to graft into the array. No new allocation will be performed, however ownership of the array will be taken, meaning it could be deleted anytime after this constructor completes. More...

	~NDArrayStore ()

T &	operator[] (const int64_t *index)

T &	operator[] (const std::vector< int64_t > &index)

T &	operator[] (std::initializer_list< int64_t > index)

T &	operator[] (int64_t pixel)

const T &	operator[] (const int64_t *index) const

const T &	operator[] (const std::vector< int64_t > &index) const

const T &	operator[] (std::initializer_list< int64_t > index) const

const T &	operator[] (int64_t pixel) const

size_t	ndim () const

size_t	bytes () const

size_t	bytesper () const

size_t	elements () const

size_t	dim (size_t dir) const

const size_t *	dim () const

void	resize (const size_t dim[D])
	Changes the dimensions (size) of the image. This does not affect rank/dimensionality. More...

void	resize (std::initializer_list< size_t > dim)
	Changes the dimensions (size) of the image. This does not affect rank/dimensionality. More...

PixelT	type () const
	Return enum PixelT type of pixels. More...

void *	data ()
	Returns a pointer to the data array. Be careful. More...

const void *	data () const
	Returns a pointer to the data array. Be careful. More...

void	graft (const size_t dim[D], T ptr, const std::function< void(void )> &deleter)
	Grafts data of the given dimensions into the image, effectively changing the image size. More...

virtual int	write (std::string filename, double version=1) const
	Write the image to a nifti file. More...

virtual ptr< NDArray >	copy () const
	Performs a deep copy of the entire array. More...

virtual ptr< NDArray >	createAnother () const
	Creates an identical array, but does not initialize pixel values. More...

virtual ptr< NDArray >	createAnother (size_t newdims, const size_t *newsize, PixelT newtype) const
	Create a new array that is the same underlying type as this. If this is an image then it will also copy the metdata, but NOT the pixels. More...

virtual ptr< NDArray >	createAnother (PixelT newtype) const
	Create a new array that is the same underlying type as this, but with a different pixel type. More...

virtual ptr< NDArray >	createAnother (size_t newdims, const size_t *newsize) const
	Create a new array that is the same underlying type as this, and same pixel type and orientation as this, but with a different size. More...

virtual ptr< NDArray >	copyCast (size_t newdims, const size_t *newsize, PixelT newtype) const
	Create a new array that is a copy of the input, possibly with new dimensions and pixeltype. The new array will have all overlapping pixels copied from the old array. More...

virtual ptr< NDArray >	copyCast (PixelT newtype) const
	Create a new array that is a copy of the input, with same dimensions but pxiels cast to newtype. The new array will have all overlapping pixels copied from the old array. More...

virtual ptr< NDArray >	copyCast (size_t newdims, const size_t *newsize) const
	Create a new array that is a copy of the input, possibly with new dimensions or size. The new array will have all overlapping pixels copied from the old array. The new array will have the same pixel type as the input array. More...

virtual ptr< NDArray >	extractCast (size_t len, const int64_t index, const size_t size) const
	Create a new array that is a copy of the input, possibly with new dimensions or size. The new array will have all overlapping pixels copied from the old array. The new array will have the same pixel type as the input array. More...

virtual ptr< NDArray >	extractCast (size_t len, const size_t *size) const
	Create a new array that is a copy of the input, possibly with new dimensions or size. The new array will have all overlapping pixels copied from the old array. The new array will have the same pixel type as the input array. Index assumed to be [0,0,...], so the output image will start at the origin of this image. More...

virtual ptr< NDArray >	extractCast (size_t len, const int64_t index, const size_t size, PixelT newtype) const
	Create a new array that is a copy of the input, possibly with new dimensions or size. The new array will have all overlapping pixels copied from the old array. The new array will have the same pixel type as the input array. More...

virtual ptr< NDArray >	extractCast (size_t len, const size_t *size, PixelT newtype) const
	Create a new array that is a copy of the input, possibly with new dimensions or size. The new array will have all overlapping pixels copied from the old array. The new array will have the same pixel type as the input array. Index assumed to be [0,0,...], so the output image will start at the origin of this image. More...

void	zero ()
	Sets all elements to zero. More...

virtual void *	__getAddr (std::initializer_list< int64_t > index) const

virtual void *	__getAddr (size_t len, const int64_t *index) const

virtual void *	__getAddr (const std::vector< int64_t > &index) const

virtual void *	__getAddr (int64_t i) const

virtual void *	__getAddr (int64_t x, int64_t y, int64_t z, int64_t t) const

virtual int64_t	getLinIndex (std::initializer_list< int64_t > index) const

virtual int64_t	getLinIndex (size_t len, const int64_t *index) const

virtual int64_t	getLinIndex (const std::vector< int64_t > &index) const

virtual int64_t	getLinIndex (int64_t x, int64_t y, int64_t z, int64_t t) const

virtual int64_t	tlen () const
	This function just returns the number of elements in a theoretical fourth dimension (ignoring orgnaization of higher dimensions) More...

bool	floatType () const
	Returns true if the stored type is FLOAT32, FLOAT64, or FLOAT128, ie is a pure float type. More...

bool	complexType () const
	Returns true if the stored type is COMPLEX256, COMPLEX128, or COMPLEX64, ie is a complex floating point type. More...

bool	signedType () const
	Returns true if the stored type is a variant of signed integer . More...

bool	unsignedType () const
	Returns true if the stored type is a variant of unsigned signed integer. More...

ptr< NDArray >	getPtr ()

ptr< const NDArray >	getConstPtr () const

Public Attributes
T *	_m_data

size_t	_m_stride [D]

size_t	_m_dim [D]

Protected Member Functions
void	updateStrides ()

virtual int	writeNifti1Image (gzFile file) const

virtual int	writeNifti2Image (gzFile file) const

virtual int	writeNifti1Header (gzFile file) const

virtual int	writeNifti2Header (gzFile file) const

virtual int	writePixels (gzFile file) const

virtual int	writeJSON (gzFile file) const

virtual int	writeCSV (gzFile file) const

Protected Attributes
std::function< void(void *)>	m_freefunc
	The function which should be called when deleting data. By default this will just be delete[], but if data is grafted or if. More...

Detailed Description

template<size_t D, typename T>
class npl::NDArrayStore< D, T >

Basic storage unity for ND array. Creates a big chunk of memory.

Template Parameters

D	dimension of array
T	type of sample

Definition at line 452 of file ndarray.h.

Constructor & Destructor Documentation

template<size_t D, typename T>

npl::NDArrayStore< D, T >::NDArrayStore ( )

Constructor with initializer list. Orientation will be default (direction = identity, spacing = 1, origin = 0).

template<size_t D, typename T>

npl::NDArrayStore< D, T >::NDArrayStore ( const std::initializer_list< size_t > & dim )

Constructor with initializer list. Orientation will be default (direction = identity, spacing = 1, origin = 0).

Parameters

dim	dimensions of input, the length of this initializer list may not be fully used if a_args is longer than D. If it is shorter then D then additional dimensions are left as size 1.

template<size_t D, typename T>

npl::NDArrayStore< D, T >::NDArrayStore ( const std::vector< size_t > & dim )

Constructor with vector. Orientation will be default (direction = identity, spacing = 1, origin = 0).

Parameters

dim	dimensions of input, the length of this initializer list may not be fully used if a_args is longer than D. If it is shorter then D then additional dimensions are left as size 1.

template<size_t D, typename T>

npl::NDArrayStore< D, T >::NDArrayStore	(	size_t	len,
		const size_t *	dim
	)

Constructor with array of length len, Orientation will be default (direction = identity, spacing = 1, origin = 0).

Parameters

len	Length of array 'size'
dim	dimensions of input, the length of this initializer list may not be fully used if a_args is longer than D. If it is shorter then D then additional dimensions are left as size 1.

template<size_t D, typename T>

npl::NDArrayStore< D, T >::NDArrayStore	(	size_t	len,
		const size_t *	dim,
		T *	ptr,
		const std::function< void(void *)> &	deleter
	)

Constructor which uses a preexsting array, to graft into the array. No new allocation will be performed, however ownership of the array will be taken, meaning it could be deleted anytime after this constructor completes.

Parameters

len	Length of array 'size'
dim	dimensions of input, the length of this initializer list may not be fully used if a_args is longer than D. If it is shorter then D then additional dimensions are left as size 1.
ptr	Pointer to data array, should be allocated with new, and size should be exactly sizeof(T)size[0]size[1]...size[len-1]
deleter	Function which should be used to delete ptr

template<size_t D, typename T>

npl::NDArrayStore< D, T >::~NDArrayStore ( )

inline

Definition at line 510 of file ndarray.h.

Member Function Documentation

template<size_t D, typename T>

virtual void* npl::NDArrayStore< D, T >::__getAddr ( std::initializer_list< int64_t > index ) const

inlinevirtual

Implements npl::NDArray.

Definition at line 765 of file ndarray.h.

template<size_t D, typename T>

virtual void* npl::NDArrayStore< D, T >::__getAddr	(	size_t	len,
		const int64_t *	index
	)		const

inlinevirtual

Implements npl::NDArray.

Definition at line 770 of file ndarray.h.

template<size_t D, typename T>

virtual void* npl::NDArrayStore< D, T >::__getAddr ( const std::vector< int64_t > & index ) const

inlinevirtual

Implements npl::NDArray.

Definition at line 775 of file ndarray.h.

template<size_t D, typename T>

virtual void* npl::NDArrayStore< D, T >::__getAddr ( int64_t i ) const

inlinevirtual

Implements npl::NDArray.

Definition at line 780 of file ndarray.h.

template<size_t D, typename T>

virtual void* npl::NDArrayStore< D, T >::__getAddr	(	int64_t	x,
		int64_t	y,
		int64_t	z,
		int64_t	t
	)		const

inlinevirtual

Implements npl::NDArray.

Definition at line 784 of file ndarray.h.

template<size_t D, typename T>

size_t npl::NDArrayStore< D, T >::bytes ( ) const

virtual

Implements npl::NDArray.

template<size_t D, typename T>

size_t npl::NDArrayStore< D, T >::bytesper ( ) const

virtual

Implements npl::NDArray.

bool npl::NDArray::complexType ( ) const

inlineinherited

Returns true if the stored type is COMPLEX256, COMPLEX128, or COMPLEX64, ie is a complex floating point type.

Returns: True if the number can be represented by a complex<long double>

Definition at line 203 of file ndarray.h.

template<size_t D, typename T>

virtual ptr<NDArray> npl::NDArrayStore< D, T >::copy ( ) const

virtual

Performs a deep copy of the entire array.

Returns: Copied array.

Implements npl::NDArray.

Reimplemented in npl::MRImageStore< D, T >, npl::MRImageStore< 3, double >, npl::MRImageStore< 4, double >, and npl::MRImageStore< 5, double >.

template<size_t D, typename T>

virtual ptr<NDArray> npl::NDArrayStore< D, T >::copyCast	(	size_t	newdims,
		const size_t *	newsize,
		PixelT	newtype
	)		const

virtual

Create a new array that is a copy of the input, possibly with new dimensions and pixeltype. The new array will have all overlapping pixels copied from the old array.

Parameters

newdims	Number of dimensions in output array
newsize	Input array sized 'newdims', indicating size of output array
newtype	Type of pixels in output array

Returns: Image with overlapping sections cast and copied from 'in'

Implements npl::NDArray.

Reimplemented in npl::MRImageStore< D, T >, npl::MRImageStore< 3, double >, npl::MRImageStore< 4, double >, and npl::MRImageStore< 5, double >.

template<size_t D, typename T>

virtual ptr<NDArray> npl::NDArrayStore< D, T >::copyCast ( PixelT newtype ) const

virtual

Create a new array that is a copy of the input, with same dimensions but pxiels cast to newtype. The new array will have all overlapping pixels copied from the old array.

Parameters

newtype Type of pixels in output array

Returns: Image with overlapping sections cast and copied from 'in'

Implements npl::NDArray.

Reimplemented in npl::MRImageStore< D, T >, npl::MRImageStore< 3, double >, npl::MRImageStore< 4, double >, and npl::MRImageStore< 5, double >.

template<size_t D, typename T>

virtual ptr<NDArray> npl::NDArrayStore< D, T >::copyCast	(	size_t	newdims,
		const size_t *	newsize
	)		const

virtual

Create a new array that is a copy of the input, possibly with new dimensions or size. The new array will have all overlapping pixels copied from the old array. The new array will have the same pixel type as the input array.

Parameters

newdims	Number of dimensions in output array
newsize	Size of output array

Returns: Image with overlapping sections cast and copied from 'in'

Implements npl::NDArray.

Reimplemented in npl::MRImageStore< D, T >, npl::MRImageStore< 3, double >, npl::MRImageStore< 4, double >, and npl::MRImageStore< 5, double >.

template<size_t D, typename T>

virtual ptr<NDArray> npl::NDArrayStore< D, T >::createAnother ( ) const

virtual

Creates an identical array, but does not initialize pixel values.

Returns: New array.

Implements npl::NDArray.

Reimplemented in npl::MRImageStore< D, T >, npl::MRImageStore< 3, double >, npl::MRImageStore< 4, double >, and npl::MRImageStore< 5, double >.

template<size_t D, typename T>

virtual ptr<NDArray> npl::NDArrayStore< D, T >::createAnother	(	size_t	newdims,
		const size_t *	newsize,
		PixelT	newtype
	)		const

virtual

Create a new array that is the same underlying type as this. If this is an image then it will also copy the metdata, but NOT the pixels.

Parameters

newdims	Number of dimensions in copied output
newsize	Size of output, this array should be of size newdims
newtype	Type of pixels in output array

Returns: Image with identical orientation but different size and pixeltype

Implements npl::NDArray.

Reimplemented in npl::MRImageStore< D, T >, npl::MRImageStore< 3, double >, npl::MRImageStore< 4, double >, and npl::MRImageStore< 5, double >.

template<size_t D, typename T>

virtual ptr<NDArray> npl::NDArrayStore< D, T >::createAnother ( PixelT newtype ) const

virtual

Create a new array that is the same underlying type as this, but with a different pixel type.

Parameters

newtype Type of pixels in output array

Returns: Image with identical orientation and size but different pixel type

Implements npl::NDArray.

Reimplemented in npl::MRImageStore< D, T >, npl::MRImageStore< 3, double >, npl::MRImageStore< 4, double >, and npl::MRImageStore< 5, double >.

template<size_t D, typename T>

virtual ptr<NDArray> npl::NDArrayStore< D, T >::createAnother	(	size_t	newdims,
		const size_t *	newsize
	)		const

virtual

Create a new array that is the same underlying type as this, and same pixel type and orientation as this, but with a different size.

Parameters

newdims	Number of dimensions in output array
newsize	Input array of length newdims that gives the size of output array,

Returns: Image with identical orientation and pixel type but different size from this

Implements npl::NDArray.

Reimplemented in npl::MRImageStore< D, T >, npl::MRImageStore< 3, double >, npl::MRImageStore< 4, double >, and npl::MRImageStore< 5, double >.

template<size_t D, typename T>

void* npl::NDArrayStore< D, T >::data ( )

inlinevirtual

Returns a pointer to the data array. Be careful.

Returns: Pointer to data

Implements npl::NDArray.

Definition at line 559 of file ndarray.h.

template<size_t D, typename T>

const void* npl::NDArrayStore< D, T >::data ( ) const

inlinevirtual

Returns a pointer to the data array. Be careful.

Returns: Pointer to data

Implements npl::NDArray.

Definition at line 566 of file ndarray.h.

template<size_t D, typename T>

size_t npl::NDArrayStore< D, T >::dim ( size_t dir ) const

virtual

Implements npl::NDArray.

template<size_t D, typename T>

const size_t* npl::NDArrayStore< D, T >::dim ( ) const

virtual

Implements npl::NDArray.

template<size_t D, typename T>

size_t npl::NDArrayStore< D, T >::elements ( ) const

virtual

Implements npl::NDArray.

template<size_t D, typename T>

virtual ptr<NDArray> npl::NDArrayStore< D, T >::extractCast	(	size_t	len,
		const int64_t *	index,
		const size_t *	size
	)		const

virtual

Create a new array that is a copy of the input, possibly with new dimensions or size. The new array will have all overlapping pixels copied from the old array. The new array will have the same pixel type as the input array.

Parameters

len	Length of index/newsize arrays
index	Index to start copying from.
size	Size of output image. Note length 0 dimensions will be removed, while length 1 dimensions will be left.

Returns: Image with overlapping sections cast and copied from 'in'

Implements npl::NDArray.

Reimplemented in npl::MRImageStore< D, T >, npl::MRImageStore< 3, double >, npl::MRImageStore< 4, double >, and npl::MRImageStore< 5, double >.

template<size_t D, typename T>

virtual ptr<NDArray> npl::NDArrayStore< D, T >::extractCast	(	size_t	len,
		const size_t *	size
	)		const

virtual

Create a new array that is a copy of the input, possibly with new dimensions or size. The new array will have all overlapping pixels copied from the old array. The new array will have the same pixel type as the input array. Index assumed to be [0,0,...], so the output image will start at the origin of this image.

Parameters

len	Length of index/size arrays
size	Size of output image. Note length 0 dimensions will be removed, while length 1 dimensions will be left.

Returns: Image with overlapping sections cast and copied from 'in'

Implements npl::NDArray.

Reimplemented in npl::MRImageStore< D, T >, npl::MRImageStore< 3, double >, npl::MRImageStore< 4, double >, and npl::MRImageStore< 5, double >.

template<size_t D, typename T>

virtual ptr<NDArray> npl::NDArrayStore< D, T >::extractCast	(	size_t	len,
		const int64_t *	index,
		const size_t *	size,
		PixelT	newtype
	)		const

virtual

Create a new array that is a copy of the input, possibly with new dimensions or size. The new array will have all overlapping pixels copied from the old array. The new array will have the same pixel type as the input array.

Parameters

len	Length of index/size arrays
index	Index to start copying from.
size	Size of output image. Note length 0 dimensions will be removed, while length 1 dimensions will be left.
newtype	Pixel type of output image.

Returns: Image with overlapping sections cast and copied from 'in'

Implements npl::NDArray.

Reimplemented in npl::MRImageStore< D, T >, npl::MRImageStore< 3, double >, npl::MRImageStore< 4, double >, and npl::MRImageStore< 5, double >.

template<size_t D, typename T>

virtual ptr<NDArray> npl::NDArrayStore< D, T >::extractCast	(	size_t	len,
		const size_t *	size,
		PixelT	newtype
	)		const

virtual

Create a new array that is a copy of the input, possibly with new dimensions or size. The new array will have all overlapping pixels copied from the old array. The new array will have the same pixel type as the input array. Index assumed to be [0,0,...], so the output image will start at the origin of this image.

Parameters

len	Length of index/size arrays
size	Size of output image. Note length 0 dimensions will be removed, while length 1 dimensions will be left.
newtype	Pixel type of output image.

Returns: Image with overlapping sections cast and copied from 'in'

Implements npl::NDArray.

Reimplemented in npl::MRImageStore< D, T >, npl::MRImageStore< 3, double >, npl::MRImageStore< 4, double >, and npl::MRImageStore< 5, double >.

bool npl::NDArray::floatType ( ) const

inlineinherited

Returns true if the stored type is FLOAT32, FLOAT64, or FLOAT128, ie is a pure float type.

Returns: True if the number can be represented by a long double

Definition at line 193 of file ndarray.h.

ptr<const NDArray> npl::NDArray::getConstPtr ( ) const

inlineinherited

Definition at line 231 of file ndarray.h.

template<size_t D, typename T>

virtual int64_t npl::NDArrayStore< D, T >::getLinIndex ( std::initializer_list< int64_t > index ) const

virtual

Implements npl::NDArray.

template<size_t D, typename T>

virtual int64_t npl::NDArrayStore< D, T >::getLinIndex	(	size_t	len,
		const int64_t *	index
	)		const

virtual

Implements npl::NDArray.

template<size_t D, typename T>

virtual int64_t npl::NDArrayStore< D, T >::getLinIndex ( const std::vector< int64_t > & index ) const

virtual

Implements npl::NDArray.

template<size_t D, typename T>

virtual int64_t npl::NDArrayStore< D, T >::getLinIndex	(	int64_t	x,
		int64_t	y,
		int64_t	z,
		int64_t	t
	)		const

virtual

Implements npl::NDArray.

ptr<NDArray> npl::NDArray::getPtr ( )

inlineinherited

Definition at line 227 of file ndarray.h.

template<size_t D, typename T>

void npl::NDArrayStore< D, T >::graft	(	const size_t	dim[D],
		T *	ptr,
		const std::function< void(void *)> &	deleter
	)

Grafts data of the given dimensions into the image, effectively changing the image size.

Parameters

dim	Dimensions of image
ptr	Pointer to data which we will take control of
deleter	Function which can be called on ptr to delete it.

template<size_t D, typename T>

size_t npl::NDArrayStore< D, T >::ndim ( ) const

virtual

Implements npl::NDArray.

template<size_t D, typename T>

T& npl::NDArrayStore< D, T >::operator[] ( const int64_t * index )

template<size_t D, typename T>

T& npl::NDArrayStore< D, T >::operator[] ( const std::vector< int64_t > & index )

template<size_t D, typename T>

T& npl::NDArrayStore< D, T >::operator[] ( std::initializer_list< int64_t > index )

template<size_t D, typename T>

T& npl::NDArrayStore< D, T >::operator[] ( int64_t pixel )

template<size_t D, typename T>

const T& npl::NDArrayStore< D, T >::operator[] ( const int64_t * index ) const

template<size_t D, typename T>

const T& npl::NDArrayStore< D, T >::operator[] ( const std::vector< int64_t > & index ) const

template<size_t D, typename T>

const T& npl::NDArrayStore< D, T >::operator[] ( std::initializer_list< int64_t > index ) const

template<size_t D, typename T>

const T& npl::NDArrayStore< D, T >::operator[] ( int64_t pixel ) const

template<size_t D, typename T>

void npl::NDArrayStore< D, T >::resize ( const size_t dim[D] )

Changes the dimensions (size) of the image. This does not affect rank/dimensionality.

Parameters

dim New size

template<size_t D, typename T>

void npl::NDArrayStore< D, T >::resize ( std::initializer_list< size_t > dim )

Changes the dimensions (size) of the image. This does not affect rank/dimensionality.

Parameters

dim New size

bool npl::NDArray::signedType ( ) const

inlineinherited

Returns true if the stored type is a variant of signed integer .

Returns: True if the number can be represented by an int64_t

Definition at line 212 of file ndarray.h.

template<size_t D, typename T>

virtual int64_t npl::NDArrayStore< D, T >::tlen ( ) const

inlinevirtual

This function just returns the number of elements in a theoretical fourth dimension (ignoring orgnaization of higher dimensions)

Returns: number of elements in the 4th or greater dimensions

Implements npl::NDArray.

Definition at line 800 of file ndarray.h.

template<size_t D, typename T>

PixelT npl::NDArrayStore< D, T >::type ( ) const

virtual

Return enum PixelT type of pixels.

Returns: Type of values stored

Implements npl::NDArray.

bool npl::NDArray::unsignedType ( ) const

inlineinherited

Returns true if the stored type is a variant of unsigned signed integer.

Returns: True if the number can be represented by an size_t

Definition at line 222 of file ndarray.h.

template<size_t D, typename T>

void npl::NDArrayStore< D, T >::updateStrides ( )

protected

template<size_t D, typename T>

virtual int npl::NDArrayStore< D, T >::write	(	std::string	filename,
		double	version = `1`
	)		const

virtual

Write the image to a nifti file.

Parameters

filename	Filename
version	Version of nifti to use

Returns: 0 if successful

Implements npl::NDArray.

Reimplemented in npl::MRImageStore< D, T >, npl::MRImageStore< 3, double >, npl::MRImageStore< 4, double >, and npl::MRImageStore< 5, double >.

template<size_t D, typename T>

virtual int npl::NDArrayStore< D, T >::writeCSV ( gzFile file ) const

protectedvirtual

template<size_t D, typename T>

virtual int npl::NDArrayStore< D, T >::writeJSON ( gzFile file ) const

protectedvirtual

Reimplemented in npl::MRImageStore< D, T >, npl::MRImageStore< 3, double >, npl::MRImageStore< 4, double >, and npl::MRImageStore< 5, double >.

template<size_t D, typename T>

virtual int npl::NDArrayStore< D, T >::writeNifti1Header ( gzFile file ) const

protectedvirtual

Reimplemented in npl::MRImageStore< D, T >, npl::MRImageStore< 3, double >, npl::MRImageStore< 4, double >, and npl::MRImageStore< 5, double >.

template<size_t D, typename T>

virtual int npl::NDArrayStore< D, T >::writeNifti1Image ( gzFile file ) const

protectedvirtual

Reimplemented in npl::MRImageStore< D, T >, npl::MRImageStore< 3, double >, npl::MRImageStore< 4, double >, and npl::MRImageStore< 5, double >.

template<size_t D, typename T>

virtual int npl::NDArrayStore< D, T >::writeNifti2Header ( gzFile file ) const

protectedvirtual

Reimplemented in npl::MRImageStore< D, T >, npl::MRImageStore< 3, double >, npl::MRImageStore< 4, double >, and npl::MRImageStore< 5, double >.

template<size_t D, typename T>

virtual int npl::NDArrayStore< D, T >::writeNifti2Image ( gzFile file ) const

protectedvirtual

Reimplemented in npl::MRImageStore< D, T >, npl::MRImageStore< 3, double >, npl::MRImageStore< 4, double >, and npl::MRImageStore< 5, double >.

template<size_t D, typename T>

virtual int npl::NDArrayStore< D, T >::writePixels ( gzFile file ) const

protectedvirtual

template<size_t D, typename T>

void npl::NDArrayStore< D, T >::zero ( )

virtual

Sets all elements to zero.

Implements npl::NDArray.

Member Data Documentation

template<size_t D, typename T>

T* npl::NDArrayStore< D, T >::_m_data

Definition at line 805 of file ndarray.h.

template<size_t D, typename T>

size_t npl::NDArrayStore< D, T >::_m_dim[D]

Definition at line 809 of file ndarray.h.

template<size_t D, typename T>

size_t npl::NDArrayStore< D, T >::_m_stride[D]

Definition at line 808 of file ndarray.h.

std::function<void(void*)> npl::NDArray::m_freefunc

protectedinherited

The function which should be called when deleting data. By default this will just be delete[], but if data is grafted or if.

Definition at line 435 of file ndarray.h.

The documentation for this class was generated from the following file:

/home/micahc/coding/npl/lib/ndarray.h

Public Member Functions

Public Attributes

Protected Member Functions

Protected Attributes

Detailed Description

template<size_t D, typename T> class npl::NDArrayStore< D, T >

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation

template<size_t D, typename T>
class npl::NDArrayStore< D, T >